Basic Information
Locus ID:
gene:TRIDC2BG078350
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
BRCA1-associated protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 737306369 | 737311991 | + | gene:TRIDC2BG078350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 60,689.59 Da | 36.82 | 78.08 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16457 | RING-H2_BRAP2 | 219 | 260 | 3.22957E-16 | - |
| CDD | cd12437 | RRM_BRAP2_like | 119 | 200 | 1.46579E-27 | - |
| Pfam | PF02148 | Zn-finger in ubiquitin-hydrolases and other protein | 275 | 334 | 4.8E-19 | IPR001607 |
| Pfam | PF07576 | BRCA1-associated protein 2 | 112 | 207 | 7.0E-32 | IPR011422 |
| SUPERFAMILY | SSF57850 | RING/U-box | 238 | 339 | 1.8E-22 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 218 | 265 | 1.81E-5 | - |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 115 | 191 | 7.34E-5 | IPR035979 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 257 | 335 | 2.7E-17 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 214 | 256 | 6.0E-6 | IPR013083 |
| SMART | SM00290 | Zf_UBP_1 | 274 | 323 | 8.9E-24 | IPR001607 |
| SMART | SM00184 | ring_2 | 221 | 260 | 0.0065 | IPR001841 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 273 | 334 | 19.362743 | IPR001607 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 221 | 261 | 11.279532 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 66 | - | - |
| Coils | Coil | Coil | 389 | 409 | - | - |
| Coils | Coil | Coil | 426 | 446 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42160.1 | zinc finger (ubiquitin-hydrolase) domain-containing protein. | 0 |
| RefSeq | XP_037487645.1 | BRAP2 RING ZnF UBP domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| E5KGE0 | BRAP2 RING ZnF UBP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRIZ1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453D8L3 | UBP-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG078350.