Basic Information
Locus ID:
gene:TRIDC2BG078200
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 734514074 | 734521436 | + | gene:TRIDC2BG078200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 72,914.57 Da | 50.73 | 66.16 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16481 | RING-H2_TTC3 | 622 | 664 | 1.62004E-19 | - |
| Pfam | PF13639 | Ring finger domain | 623 | 664 | 3.0E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 612 | 666 | 2.42E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 587 | 668 | 1.1E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 623 | 663 | 6.3E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 623 | 664 | 12.208971 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 162 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 163 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 476 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34040.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037487635.1 | probable E3 ubiquitin-protein ligase HIP1 isoform X1 [Triticum dicoccoides] | 0 |
| Q7XTV7 | Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6CEY2 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG078200.