Basic Information
Locus ID:
gene:TRIDC2BG077770
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 730092777 | 730097780 | - | gene:TRIDC2BG077770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.04 | 39,886.44 Da | 38.01 | 72.79 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 47 | 354 | 1.49659E-49 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 47 | 77 | 0.23 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 323 | 354 | 8.8E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 189 | 214 | 0.055 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 83 | 120 | 7.0E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 229 | 259 | 0.045 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 43 | 354 | 1.44E-57 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 41 | 366 | 8.6E-106 | IPR015943 |
| SMART | SM00320 | WD40_4 | 317 | 356 | 1.3E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 217 | 259 | 2.8E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 262 | 302 | 67.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 81 | 120 | 2.9E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 38 | 78 | 0.93 | IPR001680 |
| SMART | SM00320 | WD40_4 | 175 | 214 | 8.8E-5 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 227 | 268 | 12.313033 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 88 | 129 | 14.652308 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 46 | 77 | 8.544697 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 227 | 262 | 9.572873 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 88 | 125 | 11.101955 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 324 | 354 | 10.942887 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 182 | 223 | 12.780889 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 324 | 354 | 9.177421 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 46 | 87 | 10.909469 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 182 | 219 | 9.704691 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 107 | 121 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 201 | 215 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 107 | 121 | 2.1E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 201 | 215 | 2.1E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 246 | 260 | 2.1E-7 | IPR020472 |
| Hamap | MF_03008 | Eukaryotic translation initiation factor 3 subunit I [EIF3I]. | 41 | 366 | 72.806633 | IPR027525 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46290.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037487621.1 | eukaryotic translation initiation factor 3 subunit I-like [Triticum dicoccoides] | 0 |
| Q38884 | Eukaryotic translation initiation factor 3 subunit I OS=Arabidopsis thaliana OX=3702 GN=TIF3I1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6CER2 | Eukaryotic translation initiation factor 3 subunit I OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG077770.