Basic Information
Locus ID:
gene:TRIDC2BG076770
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
S-locus glycoprotein domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 724839769 | 724842307 | - | gene:TRIDC2BG076770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 91,458.88 Da | 40.01 | 82.38 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00053 | EGF | 291 | 319 | 0.00136792 | - |
| CDD | cd00028 | B_lectin | 49 | 155 | 3.1867E-25 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 335 | 414 | 4.3781E-18 | - |
| Pfam | PF00954 | S-locus glycoprotein domain | 254 | 321 | 4.7E-12 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 362 | 392 | 8.4E-6 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 518 | 797 | 1.1E-41 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 81 | 167 | 7.4E-22 | IPR001480 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 495 | 799 | 5.74E-63 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 68 | 211 | 2.36E-27 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 484 | 589 | 5.6E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 590 | 807 | 7.5E-50 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 38 | 153 | 2.5E-20 | IPR036426 |
| SMART | SM00220 | serkin_6 | 515 | 807 | 7.1E-17 | IPR000719 |
| SMART | SM00108 | blect_4 | 40 | 155 | 2.8E-27 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 6 | 822 | 2.5E-199 | IPR024171 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 287 | 325 | 8.760571 | IPR000742 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 34 | 153 | 17.031385 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 515 | 807 | 33.629745 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 339 | 414 | 8.2061 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 637 | 649 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037482480.1 | putative receptor protein kinase ZmPK1 [Triticum dicoccoides] | 0 |
| P17801 | Putative receptor protein kinase ZmPK1 OS=Zea mays OX=4577 GN=PK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7H4LP53 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS5023 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG076770.