halophFGD

Basic Information

Locus ID: gene:TRIDC2BG071430

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Description: Belongs to the ATG8 family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
2B	685141687	685144317	+	gene:TRIDC2BG071430

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.07	13,616.61 Da	30.56	90.17	-0.35

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd16128	Ubl_ATG8	12	114	3.13331E-71	-
Pfam	PF02991	Autophagy protein Atg8 ubiquitin like	14	117	4.5E-51	IPR004241
SUPERFAMILY	SSF54236	Ubiquitin-like	3	117	3.88E-43	IPR029071
Gene3D	G3DSA:3.10.20.90	-	1	118	9.0E-60	-

KEGG Pathway

KO Term:

K08341 (GABA(A) receptor-associated protein)

Pathway:

ko04068 (FoxO signaling pathway) map04068 (FoxO signaling pathway) ko04136 (Autophagy - other) map04136 (Autophagy - other) ko04137 (Mitophagy - animal) map04137 (Mitophagy - animal) ko04138 (Autophagy - yeast) map04138 (Autophagy - yeast) ko04139 (Mitophagy - yeast) map04139 (Mitophagy - yeast) ko04140 (Autophagy - animal) map04140 (Autophagy - animal) ko04212 (Longevity regulating pathway - worm) map04212 (Longevity regulating pathway - worm) ko04371 (Apelin signaling pathway) map04371 (Apelin signaling pathway) map04621 (NOD-like receptor signaling pathway)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT1G62040.1	Ubiquitin-like superfamily protein.	0
RefSeq	XP_037487263.1	autophagy-related protein 8C [Triticum dicoccoides]	0
Swiss-Prot	A2YS06	Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=3 SV=2	0
TrEMBL	U3PVX7	Autophagy-related protein OS=Triticum aestivum OX=4565 GN=ATG8e PE=2 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC2BG071430.