Basic Information
Locus ID:
gene:TRIDC2BG071320
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 684124898 | 684128570 | - | gene:TRIDC2BG071320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 82,266.22 Da | 33.49 | 83.69 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 297 | 326 | 2.59587E-6 | - |
| Pfam | PF00069 | Protein kinase domain | 418 | 682 | 3.3E-46 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 29 | 87 | 4.5E-12 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 295 | 338 | 1.99E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 401 | 685 | 4.99E-72 | IPR011009 |
| Gene3D | G3DSA:2.90.20.10 | Plasmodium vivax P25 domain | 187 | 341 | 5.5E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 397 | 490 | 1.5E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 492 | 695 | 1.8E-52 | - |
| SMART | SM00181 | egf_5 | 300 | 337 | 2.6 | IPR000742 |
| SMART | SM00179 | egfca_6 | 244 | 296 | 1.3 | IPR001881 |
| SMART | SM00220 | serkin_6 | 416 | 697 | 1.1E-31 | IPR000719 |
| SMART | SM00181 | egf_5 | 247 | 296 | 5.3 | IPR000742 |
| SMART | SM00179 | egfca_6 | 297 | 337 | 2.1E-4 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 416 | 697 | 37.71447 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 297 | 337 | 11.26093 | IPR000742 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 312 | 323 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 422 | 443 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 297 | 321 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 536 | 548 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 724 | 743 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 728 | 743 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_037487255.1 | wall-associated receptor kinase 5-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6CD24 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG071320.