Basic Information
Locus ID:
gene:TRIDC2BG070850
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 680445568 | 680448505 | - | gene:TRIDC2BG070850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 70,474.47 Da | 41.43 | 78.21 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 156 | 202 | 2.2E-5 | IPR001810 |
| Pfam | PF00400 | WD domain, G-beta repeat | 345 | 376 | 3.2E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 248 | 282 | 0.0089 | IPR001680 |
| SUPERFAMILY | SSF81383 | F-box domain | 146 | 234 | 3.27E-13 | IPR036047 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 246 | 568 | 6.96E-49 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 338 | 604 | 2.3E-36 | IPR015943 |
| Gene3D | G3DSA:1.20.1280.50 | - | 146 | 236 | 1.0E-7 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 237 | 337 | 2.7E-10 | IPR015943 |
| SMART | SM00320 | WD40_4 | 528 | 565 | 5.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 339 | 376 | 1.7E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 417 | 457 | 0.24 | IPR001680 |
| SMART | SM00320 | WD40_4 | 466 | 503 | 0.078 | IPR001680 |
| SMART | SM00320 | WD40_4 | 379 | 414 | 1.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 243 | 282 | 0.0024 | IPR001680 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 155 | 201 | 10.212818 | IPR001810 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 346 | 385 | 11.510997 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 250 | 291 | 13.382416 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 346 | 376 | 9.414692 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 250 | 286 | 10.785595 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 269 | 283 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 552 | 566 | 2.1E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 269 | 283 | 2.1E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 363 | 377 | 2.1E-5 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 147 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G21040.1 | F-box protein 2. Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses. | 0 |
| RefSeq | XP_037487237.1 | F-box/WD-40 repeat-containing protein At5g21040-like [Triticum dicoccoides] | 0 |
| Q94AD8 | F-box/WD-40 repeat-containing protein At5g21040 OS=Arabidopsis thaliana OX=3702 GN=At5g21040 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453CYV3 | F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG070850.