Basic Information
Locus ID:
gene:TRIDC2BG069850
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ribosomal_L40e
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 673514663 | 673520024 | + | gene:TRIDC2BG069850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 16,727.06 Da | 53.73 | 72.99 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 13 | 83 | 2.8E-26 | IPR000626 |
| Pfam | PF01020 | Ribosomal L40e family | 96 | 118 | 4.2E-6 | IPR001975 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 8 | 87 | 4.84E-28 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 4 | 99 | 6.4E-37 | - |
| SMART | SM00213 | ubq_7 | 11 | 82 | 1.4E-24 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 11 | 86 | 25.138908 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 37 | 62 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 21 | 41 | 1.3E-27 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 63 | 84 | 1.3E-27 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 42 | 62 | 1.3E-27 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 154 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36170.1 | Ubiquitin supergroup;Ribosomal protein L40e. | 0 |
| RefSeq | XP_044318522.1 | uncharacterized protein LOC123039396 [Triticum aestivum] | 0 |
| B9DHA6 | Ubiquitin-ribosomal protein eL40z fusion protein OS=Arabidopsis thaliana OX=3702 GN=RPL40A PE=2 SV=1 | 0 | |
| TrEMBL | A0A453CYG6 | Ubiquitin-like domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG069850.