Basic Information
Locus ID:
gene:TRIDC2BG069830
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 673438641 | 673441198 | - | gene:TRIDC2BG069830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 8,266.06 Da | 33.15 | 81.87 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 3 | 35 | 6.0E-11 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 39 | 1.91E-11 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 47 | 8.3E-20 | - |
| SMART | SM00213 | ubq_7 | 1 | 63 | 0.0014 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 35 | 10.723594 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 54 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36170.1 | Ubiquitin supergroup;Ribosomal protein L40e. | 0 |
| RefSeq | XP_028124311.1 | ubiquitin [Camellia sinensis] | 0 |
| P69310 | Ubiquitin OS=Avena sativa OX=4498 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6QUN2 | Ubiquitin-like domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM04G25220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG069830.