Basic Information
Locus ID:
gene:TRIDC2BG068710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 665918997 | 665921870 | - | gene:TRIDC2BG068710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.29 | 106,585.13 Da | 49.53 | 84.17 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 440 | 470 | 8.0E-5 | IPR001810 |
| Pfam | PF00646 | F-box domain | 21 | 57 | 9.4E-8 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 230 | 368 | 6.1E-7 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 15 | 70 | 3.01E-12 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 439 | 493 | 5.1E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 16 | 75 | 4.7E-8 | - |
| SMART | SM00256 | fbox_2 | 22 | 62 | 2.1E-7 | IPR001810 |
| SMART | SM00256 | fbox_2 | 436 | 474 | 0.006 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 526 | 718 | 3.5E-14 | IPR017451 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 121 | 346 | 4.9E-17 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 16 | 61 | 11.855471 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_034605328.1 | uncharacterized protein LOC117865281 [Setaria viridis] | 0 |
| Q9C6J3 | Putative F-box protein At1g50870 OS=Arabidopsis thaliana OX=3702 GN=At1g50870 PE=4 SV=1 | 0 | |
| TrEMBL | A0A7H4LMP8 | Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS4512 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG068710.