Basic Information
Locus ID:
gene:TRIDC2BG068270
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 662537768 | 662540377 | + | gene:TRIDC2BG068270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.86 | 42,422.55 Da | 66.67 | 63.35 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 162 | 205 | 1.4661E-17 | - |
| Pfam | PF13639 | Ring finger domain | 162 | 205 | 1.9E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 162 | 211 | 6.56E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 124 | 210 | 1.3E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 163 | 204 | 5.6E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 163 | 205 | 12.84335 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 361 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 285 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G17600.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037487102.1 | E3 ubiquitin-protein ligase Os04g0590900-like [Triticum dicoccoides] | 0 |
| Q7XLY8 | E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6CEV6 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG068270.