Basic Information
Locus ID:
gene:TRIDC2BG068030
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E3 ubiquitin-protein ligase RNF14
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 659510015 | 659512476 | - | gene:TRIDC2BG068030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 33,109.48 Da | 44.15 | 81.50 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01485 | IBR domain, a half RING-finger domain | 68 | 124 | 1.7E-8 | IPR002867 |
| SUPERFAMILY | SSF57850 | RING/U-box | 162 | 198 | 2.47E-8 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 67 | 126 | 1.08E-7 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 225 | 283 | 3.18E-9 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 1 | 80 | 1.31E-15 | - |
| Gene3D | G3DSA:1.20.120.1750 | - | 154 | 201 | 2.8E-8 | - |
| Gene3D | G3DSA:1.20.120.1750 | - | 212 | 291 | 5.5E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 82 | 3.9E-16 | IPR013083 |
| SMART | SM00647 | ibrneu5 | 67 | 124 | 1.7E-9 | IPR002867 |
| SMART | SM00184 | ring_2 | 1 | 46 | 0.26 | IPR001841 |
| SMART | SM00184 | ring_2 | 173 | 239 | 0.061 | IPR001841 |
| ProSiteProfiles | PS51873 | TRIAD supradomain profile. | 1 | 247 | 20.674524 | IPR044066 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1 | 47 | 9.184606 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 16 | 25 | - | IPR017907 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32340.1 | NDR1/HIN1-like 8. Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression is not detected under normal conditions and in response to cucumber mosaic virus or spermine. | 0 |
| RefSeq | XP_044325948.1 | E3 ubiquitin-protein ligase RNF14-like [Triticum aestivum] | 0 |
| TrEMBL | A0A453CWB6 | RBR-type E3 ubiquitin transferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG068030.