Basic Information
Locus ID:
gene:TRIDC2BG067960
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E3 ubiquitin-protein ligase RNF14
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 659238501 | 659242064 | + | gene:TRIDC2BG067960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 41,649.19 Da | 42.15 | 71.58 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01485 | IBR domain, a half RING-finger domain | 251 | 292 | 2.3E-6 | IPR002867 |
| Pfam | PF01485 | IBR domain, a half RING-finger domain | 163 | 221 | 5.5E-12 | IPR002867 |
| SUPERFAMILY | SSF57850 | RING/U-box | 90 | 176 | 6.1E-17 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 163 | 226 | 1.32E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 242 | 305 | 5.3E-14 | - |
| Gene3D | G3DSA:1.20.120.1750 | - | 236 | 331 | 1.9E-11 | - |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 42 | 4.6E-6 | IPR016135 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 91 | 177 | 2.5E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 95 | 128 | 0.13 | IPR001841 |
| SMART | SM00184 | ring_2 | 259 | 341 | 1.3 | IPR001841 |
| SMART | SM00647 | ibrneu5 | 241 | 301 | 0.019 | IPR002867 |
| SMART | SM00647 | ibrneu5 | 163 | 221 | 6.7E-15 | IPR002867 |
| ProSiteProfiles | PS51873 | TRIAD supradomain profile. | 91 | 305 | 25.78874 | IPR044066 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 95 | 143 | 9.332136 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 112 | 121 | - | IPR017907 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32340.1 | NDR1/HIN1-like 8. Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression is not detected under normal conditions and in response to cucumber mosaic virus or spermine. | 0 |
| RefSeq | XP_037482387.1 | E3 ubiquitin-protein ligase RNF14-like [Triticum dicoccoides] | 0 |
| Q9JI90 | E3 ubiquitin-protein ligase RNF14 OS=Mus musculus OX=10090 GN=Rnf14 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6CES6 | RBR-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG067960.