Basic Information
Locus ID:
gene:TRIDC2BG067550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Epidermal growth factor-like domain.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 654824433 | 654827564 | + | gene:TRIDC2BG067550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 80,347.03 Da | 48.49 | 89.04 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 288 | 320 | 1.25848E-7 | - |
| CDD | cd14066 | STKc_IRAK | 412 | 677 | 6.46534E-95 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 288 | 318 | 3.0E-6 | IPR001881 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 410 | 672 | 1.1E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 391 | 686 | 1.24E-77 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 101 | 256 | 2.37E-15 | IPR013320 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 288 | 321 | 2.54E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 368 | 481 | 1.2E-32 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 238 | 323 | 6.4E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 482 | 696 | 1.1E-59 | - |
| SMART | SM00181 | egf_5 | 291 | 329 | 0.0015 | IPR000742 |
| SMART | SM00181 | egf_5 | 239 | 287 | 14.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 406 | 677 | 1.5E-37 | IPR000719 |
| SMART | SM00179 | egfca_6 | 288 | 329 | 8.8E-7 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 406 | 687 | 38.378769 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 288 | 320 | 9.690437 | IPR000742 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 412 | 434 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 288 | 311 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 525 | 537 | - | IPR008271 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 302 | 313 | - | IPR000152 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_037487058.1 | wall-associated receptor kinase 2-like [Triticum dicoccoides] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6CCD2 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG067550.