Basic Information
Locus ID:
gene:TRIDC2BG066550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 647132347 | 647135662 | + | gene:TRIDC2BG066550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 39,978.97 Da | 62.03 | 51.15 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 325 | 366 | 2.10623E-16 | - |
| Pfam | PF13639 | Ring finger domain | 324 | 366 | 6.4E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 307 | 368 | 2.99E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 290 | 370 | 2.8E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 325 | 365 | 1.0E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 325 | 366 | 11.427062 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 201 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 95 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10650.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037487011.1 | E3 ubiquitin-protein ligase RLIM-like [Triticum dicoccoides] | 0 |
| O49500 | E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1 | 0 | |
| TrEMBL | W5BQU8 | Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS4349 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG066550.