Basic Information
Locus ID:
gene:TRIDC2BG062940
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 617106446 | 617113486 | - | gene:TRIDC2BG062940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 50,314.32 Da | 50.78 | 76.89 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 323 | 356 | 0.044 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 275 | 311 | 1.8E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 144 | 455 | 5.49E-37 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 138 | 457 | 1.1E-74 | IPR015943 |
| SMART | SM00320 | WD40_4 | 413 | 455 | 390.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 319 | 357 | 6.1E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 271 | 311 | 1.7E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 186 | 226 | 15.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 228 | 268 | 30.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 325 | 356 | 9.739832 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 278 | 313 | 11.233774 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 278 | 320 | 13.816853 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 298 | 312 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 97 | - | - |
| Coils | Coil | Coil | 20 | 47 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80710.1 | DROUGHT SENSITIVE 1. Encodes a WD40 repeat family protein containing a DWD (DDB1 binding WD40) motif. Mutant analysis demonstrates that DRS1 promotes tolerance to drought stress, possibly mediated by ABA, and suggests involvement of DDB1 Cul4mediated protein degradation in drought response. | 0 |
| RefSeq | XP_037486803.1 | DNA damage-binding protein cmr1-like [Triticum dicoccoides] | 0 |
| Q4KLQ5 | WD repeat-containing protein 76 OS=Xenopus laevis OX=8355 GN=wdr76 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6CB37 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG062940.