Basic Information
Locus ID:
gene:TRIDC2BG062500
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Beach domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 612679232 | 612699477 | + | gene:TRIDC2BG062500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 316,360.88 Da | 46.82 | 88.43 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01201 | PH_BEACH | 2033 | 2141 | 1.86638E-29 | IPR023362 |
| CDD | cd06071 | Beach | 2168 | 2445 | 1.7549E-152 | IPR000409 |
| Pfam | PF15787 | Domain of unknown function (DUF4704) | 589 | 869 | 2.5E-43 | IPR031570 |
| Pfam | PF00400 | WD domain, G-beta repeat | 2600 | 2630 | 3.6E-7 | IPR001680 |
| Pfam | PF02138 | Beige/BEACH domain | 2169 | 2445 | 1.3E-117 | IPR000409 |
| Pfam | PF14844 | PH domain associated with Beige/BEACH | 2043 | 2140 | 1.8E-28 | IPR023362 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 292 | 519 | 2.75E-7 | IPR013320 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 2567 | 2878 | 2.69E-28 | IPR036322 |
| SUPERFAMILY | SSF81837 | BEACH domain | 2159 | 2445 | 2.35E-125 | IPR036372 |
| SUPERFAMILY | SSF50729 | PH domain-like | 2033 | 2141 | 3.07E-23 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 2558 | 2890 | 7.9E-28 | IPR015943 |
| Gene3D | G3DSA:1.10.1540.10 | BEACH domain | 2157 | 2445 | 1.9E-137 | IPR036372 |
| Gene3D | G3DSA:2.30.29.30 | - | 2033 | 2140 | 6.4E-32 | IPR011993 |
| SMART | SM00320 | WD40_4 | 2592 | 2631 | 3.8E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 2676 | 2715 | 3.6 | IPR001680 |
| SMART | SM01026 | Beach_2 | 2168 | 2445 | 4.1E-195 | IPR000409 |
| SMART | SM00320 | WD40_4 | 2839 | 2879 | 13.0 | IPR001680 |
| ProSiteProfiles | PS50197 | BEACH domain profile. | 2156 | 2445 | 117.96907 | IPR000409 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 2599 | 2632 | 11.945589 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 2599 | 2640 | 14.685726 | IPR001680 |
| ProSiteProfiles | PS51783 | BEACH-type PH domain profile. | 2030 | 2141 | 33.407467 | IPR023362 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1979 | 2006 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2639 | 2665 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2641 | 2658 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1331 | 1355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1981 | 2006 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45540.1 | WD-40 repeat family protein / beige-related. | 0 |
| RefSeq | XP_037486780.1 | BEACH domain-containing protein C2-like isoform X2 [Triticum dicoccoides] | 0 |
| F4IG73 | BEACH domain-containing protein C2 OS=Arabidopsis thaliana OX=3702 GN=BCHC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6CB57 | DUF4704 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG062500.