Basic Information
Locus ID:
gene:TRIDC2BG061760
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 608326107 | 608328787 | + | gene:TRIDC2BG061760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 60,052.13 Da | 46.21 | 80.09 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 97 | 354 | 4.22991E-136 | - |
| Pfam | PF13499 | EF-hand domain pair | 402 | 462 | 4.3E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 97 | 355 | 1.5E-73 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 471 | 534 | 2.4E-13 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 97 | 371 | 7.42E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 393 | 534 | 2.32E-47 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 99 | 182 | 1.2E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 361 | 7.9E-58 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 362 | 536 | 1.0E-60 | - |
| SMART | SM00054 | efh_1 | 473 | 501 | 6.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 401 | 429 | 3.3E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 97 | 355 | 4.6E-99 | IPR000719 |
| SMART | SM00054 | efh_1 | 437 | 465 | 6.5E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 508 | 536 | 6.4E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 397 | 432 | 15.210791 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 505 | 537 | 13.397589 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 97 | 355 | 48.428043 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 433 | 468 | 12.7281 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 469 | 504 | 16.828724 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 410 | 422 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 482 | 494 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 517 | 529 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 103 | 126 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 217 | 229 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 446 | 458 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 63 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76040.2 | calcium-dependent protein kinase 29. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037486739.1 | calcium-dependent protein kinase 12-like [Triticum dicoccoides] | 0 |
| Q7XSQ5 | Calcium-dependent protein kinase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK12 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6CB13 | Calcium-dependent protein kinase 29 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG061760.