Basic Information
Locus ID:
gene:TRIDC2BG059430
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 581296264 | 581299056 | + | gene:TRIDC2BG059430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 28,572.90 Da | 44.72 | 105.14 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 186 | 227 | 2.12337E-22 | - |
| Pfam | PF00069 | Protein kinase domain | 3 | 148 | 4.5E-18 | IPR000719 |
| Pfam | PF04564 | U-box domain | 182 | 253 | 5.3E-16 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 182 | 253 | 1.32E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 151 | 3.28E-27 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 165 | 1.3E-29 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 181 | 256 | 1.4E-24 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 185 | 248 | 1.2E-20 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 162 | 19.891497 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 181 | 255 | 32.483177 | IPR003613 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 19 | 31 | - | IPR008266 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_044320233.1 | U-box domain-containing protein 57-like [Triticum aestivum] | 0 |
| Q0DR28 | U-box domain-containing protein 57 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB57 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6CAD6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG059430.