Basic Information
Locus ID:
gene:TRIDC2BG059420
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ICP0-binding domain of Ubiquitin-specific protease 7
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 581295213 | 581570065 | + | gene:TRIDC2BG059420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 75,244.39 Da | 45.91 | 94.28 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 595 | 636 | 2.593E-21 | - |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 64 | 246 | 2.3E-41 | IPR024729 |
| Pfam | PF04564 | U-box domain | 591 | 662 | 5.9E-15 | IPR003613 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 320 | 559 | 3.8E-27 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 297 | 560 | 3.1E-51 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 591 | 661 | 3.0E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 124 | 238 | 3.2E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 383 | 570 | 1.0E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 291 | 382 | 3.8E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 590 | 664 | 5.4E-24 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 594 | 657 | 5.4E-20 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 590 | 664 | 29.572941 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 315 | 571 | 24.73946 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 428 | 440 | - | IPR008266 |
| Coils | Coil | Coil | 236 | 295 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037486587.1 | U-box domain-containing protein 57-like isoform X2 [Triticum dicoccoides] | 0 |
| Q0DR28 | U-box domain-containing protein 57 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB57 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7TLQ1 | U-box domain-containing protein 33 OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG059420.