Basic Information
Locus ID:
gene:TRIDC2BG058290
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 569586083 | 569591655 | + | gene:TRIDC2BG058290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 78,247.94 Da | 48.88 | 67.17 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 676 | 717 | 1.00217E-18 | - |
| Pfam | PF13639 | Ring finger domain | 676 | 717 | 2.7E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 667 | 720 | 7.3E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 642 | 721 | 3.4E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 676 | 716 | 7.5E-9 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 676 | 717 | 12.430266 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 516 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 478 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 516 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 119 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04790.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037486508.1 | uncharacterized protein LOC119365028 [Triticum dicoccoides] | 0 |
| Q69U49 | Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RMR1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6CA73 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG058290.