Basic Information
Locus ID:
gene:TRIDC2BG057340
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 558400910 | 558406259 | - | gene:TRIDC2BG057340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.19 | 72,233.10 Da | 37.36 | 85.06 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 438 | 469 | 0.00163315 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 22 | 61 | 1.1E-8 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 565 | 650 | 1.2E-14 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 541 | 667 | 1.17E-29 | IPR011009 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 391 | 480 | 6.59E-5 | IPR009030 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 441 | 481 | 2.0E-6 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 384 | 440 | 6.9E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 526 | 637 | 5.4E-32 | - |
| SMART | SM00181 | egf_5 | 441 | 480 | 13.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 230 | 277 | 21.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 438 | 480 | 1.1E-5 | IPR001881 |
| SMART | SM00181 | egf_5 | 384 | 437 | 4.4 | IPR000742 |
| SMART | SM00179 | egfca_6 | 230 | 277 | 0.83 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 562 | 668 | 15.396887 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 438 | 463 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 568 | 590 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 0 |
| RefSeq | XP_047063909.1 | wall-associated receptor kinase 5-like [Lolium rigidum] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453CH72 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG057340.