Basic Information
Locus ID:
gene:TRIDC2BG056760
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 554049335 | 554054650 | - | gene:TRIDC2BG056760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 86,990.47 Da | 63.23 | 63.04 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 460 | 497 | 9.2E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 314 | 346 | 4.7E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 419 | 455 | 2.5E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 311 | 638 | 1.81E-55 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 301 | 656 | 1.3E-60 | IPR015943 |
| SMART | SM00320 | WD40_4 | 554 | 590 | 11.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 500 | 538 | 1.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 308 | 347 | 1.0E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 458 | 497 | 5.6E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 591 | 632 | 1.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 417 | 455 | 1.2E-10 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 424 | 458 | 10.811958 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 424 | 464 | 13.917108 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 464 | 498 | 9.520146 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 464 | 498 | 11.377324 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 315 | 348 | 13.883689 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 315 | 348 | 11.497408 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 442 | 456 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 334 | 348 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 334 | 348 | 3.8E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 442 | 456 | 3.8E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 484 | 498 | 3.8E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 750 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 698 | 724 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 757 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 156 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 233 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54200.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037486394.1 | WD repeat-containing protein 44-like isoform X2 [Triticum dicoccoides] | 0 |
| Q498F0 | WD repeat-containing protein 44 OS=Xenopus laevis OX=8355 GN=wdr44 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6C9U0 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG056760.