Basic Information
Locus ID:
gene:TRIDC2BG056530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 551204805 | 551207671 | - | gene:TRIDC2BG056530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 79,701.18 Da | 27.45 | 90.45 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 407 | 673 | 3.6708E-93 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 84 | 319 | 9.1318E-97 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 83 | 330 | 3.2E-76 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 402 | 668 | 1.8E-46 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 84 | 338 | 2.33E-74 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 687 | 5.74E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 386 | 476 | 1.3E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 478 | 679 | 5.7E-57 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 82 | 322 | 4.3E-65 | - |
| SMART | SM00220 | serkin_6 | 401 | 671 | 5.0E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 401 | 671 | 37.912346 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 407 | 430 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 522 | 534 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 710 | 730 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_037486370.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum dicoccoides] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6DGQ5 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG056530.