Basic Information
Locus ID:
gene:TRIDC2BG056000
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 547640468 | 547644149 | + | gene:TRIDC2BG056000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 57,130.40 Da | 47.23 | 98.29 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 26 | 63 | 3.5E-8 | IPR001810 |
| Pfam | PF08387 | FBD | 394 | 430 | 6.2E-7 | IPR006566 |
| SUPERFAMILY | SSF52047 | RNI-like | 169 | 372 | 1.18E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 25 | 66 | 1.44E-12 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 158 | 426 | 3.1E-8 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 27 | 64 | 3.1E-7 | - |
| SMART | SM00256 | fbox_2 | 29 | 69 | 6.5E-6 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 23 | 73 | 9.709425 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02920.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_037486332.1 | putative F-box/LRR-repeat protein At3g28410 [Triticum dicoccoides] | 0 |
| Q1PE04 | F-box/LRR-repeat protein 25 OS=Arabidopsis thaliana OX=3702 GN=FBL25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7TL33 | FBD domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG056000.