Basic Information
Locus ID:
gene:TRIDC2BG055610
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 544997380 | 545003264 | + | gene:TRIDC2BG055610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 28,538.78 Da | 36.48 | 78.00 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 113 | 145 | 0.062 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 26 | 247 | 2.14E-30 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 9 | 254 | 5.0E-31 | IPR015943 |
| SMART | SM00320 | WD40_4 | 105 | 145 | 0.0017 | IPR001680 |
| SMART | SM00320 | WD40_4 | 17 | 54 | 480.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 59 | 99 | 0.039 | IPR001680 |
| SMART | SM00320 | WD40_4 | 195 | 243 | 27.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 112 | 148 | 9.151057 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 112 | 148 | 10.909469 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 132 | 146 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63010.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037486307.1 | diphthine methyltransferase homolog [Triticum dicoccoides] | 0 |
| Q55C80 | Diphthine methyltransferase homolog OS=Dictyostelium discoideum OX=44689 GN=wdr85 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6C9H8 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG055610.