Basic Information
Locus ID:
gene:TRIDC2BG055420
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 542767087 | 542770271 | + | gene:TRIDC2BG055420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 110,702.04 Da | 37.98 | 107.11 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 1.2E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 703 | 996 | 1.6E-41 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 267 | 288 | 1.4 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 181 | 5.3E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 538 | 597 | 1.0E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 395 | 454 | 2.4E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 684 | 1000 | 6.61E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 370 | 623 | 1.02E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 328 | 3.91E-61 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 1006 | 2.9E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 682 | 783 | 4.0E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 141 | 234 | 4.1E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 140 | 8.7E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 331 | 633 | 2.8E-82 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 235 | 330 | 9.7E-15 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 120 | 141 | 46.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 168 | 197 | 200.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 344 | 374 | 160.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 441 | 467 | 43.0 | - |
| SMART | SM00369 | LRR_typ_2 | 584 | 609 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 265 | 288 | 6.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 216 | 240 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 344 | 367 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 560 | 583 | 96.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 702 | 1003 | 7.2E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 120 | 143 | 7.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 512 | 536 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 192 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 417 | 441 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 465 | 489 | 11.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 562 | 585 | 7.619546 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 146 | 168 | 7.165205 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 702 | 1004 | 36.993637 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 122 | 143 | 7.00349 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 832 | 844 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 512 | 525 | 5.3E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 123 | 136 | 5.3E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_044318447.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Triticum aestivum] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6C9I9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG055420.