HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC2BG052340
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
Chromosome Start End Strand ID
2B 513433323 513434129 + gene:TRIDC2BG052340
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.43 10,715.09 Da 40.49 91.80 0.28
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00651 BTB/POZ domain 14 83 1.3E-9 IPR000210
SUPERFAMILY SSF54695 POZ domain 15 81 2.67E-8 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 5 100 1.4E-12 IPR011333
ProSiteProfiles PS50097 BTB domain profile. 15 84 11.915877 IPR000210
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_037486034.1 BTB/POZ and TAZ domain-containing protein 2-like [Triticum dicoccoides] 0
TrEMBL A0A3B6C8M9 BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC2BG052340.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.