Basic Information
Locus ID:
gene:TRIDC2BG046510
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 452846322 | 452850804 | + | gene:TRIDC2BG046510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 59,515.64 Da | 50.71 | 83.67 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02662 | Peptidase_C19F | 66 | 535 | 1.46421E-50 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 66 | 534 | 1.3E-35 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 66 | 536 | 3.11E-65 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 63 | 537 | 1.1E-67 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 65 | 537 | 35.310959 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 66 | 81 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 468 | 485 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39370.1 | ubiquitin-specific protease 27. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037485625.1 | ubiquitin carboxyl-terminal hydrolase 27-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9FPS0 | Ubiquitin carboxyl-terminal hydrolase 27 OS=Arabidopsis thaliana OX=3702 GN=UBP27 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6C744 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG046510.