Basic Information
Locus ID:
gene:TRIDC2BG046260
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
DUF4205
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 450522942 | 450533467 | - | gene:TRIDC2BG046260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 68,968.72 Da | 52.77 | 87.39 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13898 | Domain of unknown function (DUF4205) | 149 | 453 | 1.1E-63 | IPR025257 |
| SUPERFAMILY | SSF47473 | EF-hand | 453 | 515 | 6.4E-5 | IPR011992 |
| SMART | SM01174 | DUF4205_3 | 147 | 508 | 1.2E-153 | IPR025257 |
| ProSiteProfiles | PS50330 | Ubiquitin-interacting motif (UIM) domain profile. | 5 | 24 | 9.913769 | IPR003903 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 54 | - | - |
| Coils | Coil | Coil | 444 | 464 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G43690.1 | ubiquitin interaction motif-containing protein. | 0 |
| RefSeq | XP_037485609.1 | ubiquitin carboxyl-terminal hydrolase MINDY-3-like isoform X1 [Triticum dicoccoides] | 0 |
| Q0IIH8 | Ubiquitin carboxyl-terminal hydrolase MINDY-3 OS=Bos taurus OX=9913 GN=MINDY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6C733 | ubiquitinyl hydrolase 1 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG046260.