Basic Information
Locus ID:
gene:TRIDC2BG046050
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 448853622 | 448862374 | - | gene:TRIDC2BG046050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 75,601.70 Da | 41.44 | 72.66 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 254 | 285 | 0.0055 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 338 | 374 | 4.7E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 380 | 416 | 1.6E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 250 | 553 | 2.0E-50 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 238 | 583 | 6.5E-53 | IPR015943 |
| SMART | SM00320 | WD40_4 | 418 | 457 | 1.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 377 | 416 | 1.9E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 336 | 374 | 2.9E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 472 | 508 | 56.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 247 | 286 | 7.1E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 509 | 550 | 4.6 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 383 | 417 | 11.418318 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 529 | 559 | 9.372231 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 254 | 287 | 13.315579 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 343 | 375 | 9.783781 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 254 | 287 | 11.049229 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 343 | 375 | 11.711506 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 383 | 417 | 13.783434 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 537 | 551 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 403 | 417 | 9.0E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 361 | 375 | 9.0E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 273 | 287 | 9.0E-7 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 37 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24320.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037485588.1 | WD repeat-containing protein YMR102C-like [Triticum dicoccoides] | 0 |
| Q9XSC3 | WD repeat-containing protein 44 OS=Bos taurus OX=9913 GN=WDR44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6C6Z9 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG046050.