Basic Information
Locus ID:
gene:TRIDC2BG043280
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 414259387 | 414263533 | - | gene:TRIDC2BG043280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 73,358.51 Da | 59.16 | 79.33 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04564 | U-box domain | 288 | 359 | 2.7E-15 | IPR003613 |
| SUPERFAMILY | SSF48371 | ARM repeat | 432 | 609 | 7.09E-14 | IPR016024 |
| SUPERFAMILY | SSF57850 | RING/U-box | 286 | 360 | 3.44E-18 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 375 | 605 | 9.2E-14 | IPR011989 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 284 | 365 | 2.1E-17 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 291 | 354 | 1.2E-7 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 287 | 361 | 14.915615 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 620 | 646 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 125 | 162 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 630 | 646 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037489104.1 | uncharacterized protein LOC119367800 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6C696 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG043280.