Basic Information
Locus ID:
gene:TRIDC2BG042220
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
PHOT2
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 404545851 | 404564942 | - | gene:TRIDC2BG042220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 100,096.71 Da | 49.83 | 76.56 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 564 | 876 | 0.0 | - |
| CDD | cd00130 | PAS | 380 | 480 | 3.19464E-10 | IPR000014 |
| CDD | cd00130 | PAS | 124 | 213 | 1.71182E-8 | IPR000014 |
| Pfam | PF13426 | PAS domain | 388 | 480 | 5.3E-21 | IPR000014 |
| Pfam | PF00069 | Protein kinase domain | 568 | 853 | 8.7E-62 | IPR000719 |
| Pfam | PF13426 | PAS domain | 119 | 214 | 4.6E-21 | IPR000014 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 545 | 873 | 2.83E-82 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 118 | 210 | 3.22E-26 | IPR035965 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 381 | 480 | 8.66E-24 | IPR035965 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 111 | 272 | 7.3E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 565 | 649 | 7.8E-94 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 354 | 518 | 2.8E-56 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 650 | 861 | 7.8E-94 | - |
| SMART | SM00220 | serkin_6 | 566 | 853 | 3.6E-90 | IPR000719 |
| SMART | SM00091 | pas_2 | 99 | 168 | 2.9 | IPR000014 |
| SMART | SM00091 | pas_2 | 367 | 436 | 1.4 | IPR000014 |
| SMART | SM00086 | pac_2 | 442 | 484 | 9.8E-6 | IPR001610 |
| SMART | SM00086 | pac_2 | 174 | 216 | 6.4E-7 | IPR001610 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 124 | 214 | 1.3E-11 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 390 | 483 | 9.8E-10 | IPR000014 |
| ProSiteProfiles | PS50113 | PAC domain profile. | 439 | 493 | 11.437892 | IPR000700 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 566 | 853 | 45.459904 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 97 | 170 | 12.743052 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 365 | 438 | 9.813698 | IPR000014 |
| ProSiteProfiles | PS50113 | PAC domain profile. | 171 | 225 | 12.81999 | IPR000700 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 687 | 699 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 572 | 595 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 40 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58140.1 | phototropin 2. Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light. | 0 |
| RefSeq | XP_037485267.1 | phototropin-2-like [Triticum dicoccoides] | 0 |
| Q9ST27 | Phototropin-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PHOT2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6C639 | LOV domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG042220.