Basic Information
Locus ID:
gene:TRIDC2BG042150
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 403998996 | 404002238 | - | gene:TRIDC2BG042150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 70,143.48 Da | 40.87 | 89.52 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 208 | 297 | 7.02798E-13 | - |
| Pfam | PF00954 | S-locus glycoprotein domain | 104 | 176 | 5.7E-6 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 219 | 276 | 9.6E-6 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 374 | 570 | 1.0E-46 | IPR000719 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 3 | 46 | 4.71E-9 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 584 | 8.9E-70 | IPR011009 |
| SUPERFAMILY | SSF57414 | Hairpin loop containing domain-like | 230 | 272 | 6.67E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 334 | 444 | 2.0E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 445 | 621 | 6.9E-48 | - |
| SMART | SM00220 | serkin_6 | 371 | 615 | 4.6E-31 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 1 | 57 | 8.041773 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 371 | 628 | 36.371742 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 212 | 299 | 7.842392 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 490 | 502 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 377 | 398 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_044324094.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Triticum aestivum] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6C8K8 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG042150.