Basic Information
Locus ID:
gene:TRIDC2BG039460
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 376702373 | 376710358 | + | gene:TRIDC2BG039460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 114,277.26 Da | 34.34 | 99.60 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 121 | 143 | 0.89 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 414 | 472 | 2.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 511 | 570 | 1.6E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 791 | 989 | 6.8E-27 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 69 | 9.8E-10 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 100 | 592 | 7.45E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 790 | 1066 | 7.4E-46 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 185 | 389 | 2.38E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 866 | 1069 | 3.1E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 240 | 622 | 2.6E-80 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 183 | 7.0E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 776 | 864 | 1.9E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 238 | 1.1E-9 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 167 | 190 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 119 | 143 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 316 | 340 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 95 | 118 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 557 | 580 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 215 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 459 | 483 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 533 | 556 | 96.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 787 | 1069 | 26.294199 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 674 | 733 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 674 | 703 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20940.1 | Leucine-rich receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037485090.1 | LRR receptor-like serine/threonine-protein kinase GHR1 [Triticum dicoccoides] | 0 |
| C0LGQ9 | LRR receptor-like serine/threonine-protein kinase GHR1 OS=Arabidopsis thaliana OX=3702 GN=GHR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6C5J5 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG039460.