Basic Information
Locus ID:
gene:TRIDC2BG038310
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 361848613 | 361860014 | + | gene:TRIDC2BG038310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 99,075.07 Da | 47.55 | 77.17 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 740 | 893 | 3.66876E-58 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 259 | 892 | 1.8E-80 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 257 | 894 | 2.94E-105 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 625 | 895 | 5.8E-54 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 248 | 493 | 8.5E-66 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 259 | 895 | 54.694775 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 260 | 275 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 838 | 855 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_037485033.1 | ubiquitin carboxyl-terminal hydrolase 8-like [Triticum dicoccoides] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6C7T0 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG038310.