Basic Information
Locus ID:
gene:TRIDC2BG038220
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 361060525 | 361065326 | + | gene:TRIDC2BG038220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 58,069.40 Da | 39.99 | 88.25 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 370 | 429 | 5.66193E-18 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 64 | 321 | 3.72019E-142 | - |
| Pfam | PF13499 | EF-hand domain pair | 370 | 430 | 5.8E-12 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 64 | 322 | 7.7E-75 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 440 | 501 | 1.1E-13 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 361 | 502 | 8.98E-46 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 63 | 323 | 2.83E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 150 | 326 | 3.3E-56 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 329 | 505 | 1.6E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 66 | 149 | 1.3E-29 | - |
| SMART | SM00220 | serkin_6 | 64 | 322 | 1.7E-98 | IPR000719 |
| SMART | SM00054 | efh_1 | 369 | 397 | 6.8E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 475 | 503 | 8.8E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 405 | 433 | 0.74 | IPR002048 |
| SMART | SM00054 | efh_1 | 441 | 469 | 0.0022 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 437 | 472 | 14.48551 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 64 | 322 | 47.42453 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 473 | 506 | 12.644413 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 365 | 400 | 15.768698 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 401 | 436 | 9.687501 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 450 | 462 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 484 | 496 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 184 | 196 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 70 | 97 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 378 | 390 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 414 | 426 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 32 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38910.1 | calcium-dependent protein kinase 20. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037485045.1 | calcium-dependent protein kinase 17-like [Triticum dicoccoides] | 0 |
| Q7XIM0 | Calcium-dependent protein kinase 17 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6C5A8 | Calcium-dependent protein kinase 20 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG038220.