Basic Information
Locus ID:
gene:TRIDC2BG036190
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
TPL-binding domain in jasmonate signalling
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 318675109 | 318691618 | - | gene:TRIDC2BG036190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 163,774.53 Da | 43.17 | 72.30 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 848 | 886 | 4.02065E-17 | - |
| CDD | cd04301 | NAT_SF | 1039 | 1099 | 0.00511908 | - |
| Pfam | PF00628 | PHD-finger | 848 | 888 | 6.4E-7 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 770 | 820 | 1.3E-18 | IPR032308 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 837 | 891 | 1.22E-12 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 1034 | 1122 | 5.31E-8 | IPR016181 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 836 | 937 | 3.7E-16 | IPR013083 |
| SMART | SM00249 | PHD_3 | 888 | 944 | 7.5 | IPR001965 |
| SMART | SM00249 | PHD_3 | 847 | 887 | 1.7E-10 | IPR001965 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 984 | 1146 | 9.777465 | IPR000182 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 845 | 889 | 9.116199 | IPR019787 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 423 | 572 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 665 | 707 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 543 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 460 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 509 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 196 | - | - |
| Coils | Coil | Coil | 511 | 531 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05380.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein. | 0 |
| RefSeq | XP_037484907.1 | uncharacterized protein LOC119363637 [Triticum dicoccoides] | 0 |
| F4IXE7 | Increased DNA methylation 1 OS=Arabidopsis thaliana OX=3702 GN=IDM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6C7F1 | PHD-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG036190.