Basic Information
Locus ID:
gene:TRIDC2BG034020
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 267872166 | 267877590 | + | gene:TRIDC2BG034020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.07 | 54,501.23 Da | 40.36 | 78.14 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 65 | 357 | 4.58E-23 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 67 | 410 | 6.9E-21 | IPR015943 |
| SMART | SM00320 | WD40_4 | 248 | 287 | 190.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 290 | 330 | 0.011 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 298 | 339 | 9.171722 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 317 | 331 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 459 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G29320.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037484797.1 | WD repeat-containing protein 74-like [Triticum dicoccoides] | 0 |
| A5DKC4 | Ribosome biogenesis protein NSA1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=NSA1 PE=3 SV=2 | 0 | |
| TrEMBL | A0A3B6C4K3 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG034020.