Basic Information
Locus ID:
gene:TRIDC2BG030300
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
SYMRK
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 223906134 | 223910004 | - | gene:TRIDC2BG030300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 61,010.31 Da | 41.92 | 78.72 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 219 | 486 | 3.46759E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 215 | 485 | 2.8E-44 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 116 | 1.22E-13 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 193 | 485 | 6.2E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 289 | 502 | 8.3E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 5 | 124 | 5.9E-22 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 186 | 287 | 2.0E-29 | - |
| SMART | SM00220 | serkin_6 | 213 | 490 | 1.5E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 213 | 490 | 34.20924 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 219 | 241 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 335 | 347 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51880.3 | - | 0 |
| RefSeq | XP_037484497.1 | nodulation receptor kinase-like [Triticum dicoccoides] | 0 |
| Q8L4H4 | Nodulation receptor kinase OS=Medicago truncatula OX=3880 GN=NORK PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6C673 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG030300.