Basic Information
Locus ID:
gene:TRIDC2BG026830
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
In Between Ring fingers
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 190283325 | 190284043 | - | gene:TRIDC2BG026830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.75 | 21,258.29 Da | 27.80 | 81.98 | 0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14634 | zinc-RING finger domain | 109 | 159 | 6.5E-7 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 103 | 187 | 5.3E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 103 | 192 | 2.7E-21 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 109 | 154 | 10.92546 | IPR001841 |
| ProSiteProfiles | PS51873 | TRIAD supradomain profile. | 105 | 202 | 11.985905 | IPR044066 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 127 | 136 | - | IPR017907 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037488920.1 | probable E3 ubiquitin-protein ligase RNF217 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6C2X8 | RBR-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG026830.