Basic Information
Locus ID:
gene:TRIDC2BG026490
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
In Between Ring fingers
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 188773506 | 188774144 | + | gene:TRIDC2BG026490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.75 | 14,286.22 Da | 28.95 | 80.51 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13445 | RING-type zinc-finger | 73 | 118 | 1.1E-6 | IPR027370 |
| SUPERFAMILY | SSF57850 | RING/U-box | 67 | 124 | 2.44E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 67 | 137 | 7.5E-16 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 73 | 118 | 10.394352 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 91 | 100 | - | IPR017907 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044319650.1 | probable E3 ubiquitin-protein ligase RNF144A-B [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6C334 | RBR-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG026490.