Basic Information
Locus ID:
gene:TRIDC2BG025750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 181015753 | 181018313 | - | gene:TRIDC2BG025750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 19,094.38 Da | 41.26 | 72.30 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 5 | 30 | 0.0078 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 2 | 170 | 1.44E-25 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 169 | 6.6E-50 | IPR015943 |
| SMART | SM00320 | WD40_4 | 1 | 30 | 26.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 125 | 167 | 69.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 33 | 73 | 2.8 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1 | 39 | 11.778342 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1 | 33 | 9.045603 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14050.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_047088384.1 | U3 small nucleolar RNA-associated protein 18 homolog [Lolium rigidum] | 0 |
| Q9FMU5 | U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g14050 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7RFJ9 | U3 small nucleolar RNA-associated protein 18-like protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG025750.