Basic Information
Locus ID:
gene:TRIDC2BG025040
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 173128551 | 173135163 | - | gene:TRIDC2BG025040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.99 | 78,756.24 Da | 37.76 | 82.54 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 78 | 1.6E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 127 | 184 | 8.7E-11 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 424 | 690 | 2.9E-35 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 691 | 1.83E-65 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 256 | 2.47E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 382 | 497 | 4.7E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 498 | 716 | 1.1E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 267 | 2.2E-46 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 103 | 128 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 150 | 172 | 2.5 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 199 | 221 | 7.350022 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 420 | 694 | 33.248127 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 152 | 173 | 7.727356 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 295 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_037484151.1 | protein STRUBBELIG-RECEPTOR FAMILY 7-like isoform X2 [Triticum dicoccoides] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6C2I4 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG025040.