Basic Information
Locus ID:
gene:TRIDC2BG023640
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 162545921 | 162547141 | - | gene:TRIDC2BG023640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.80 | 19,528.71 Da | 54.54 | 71.55 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 89 | 128 | 8.63006E-17 | - |
| Pfam | PF13639 | Ring finger domain | 89 | 128 | 6.0E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 89 | 134 | 5.96E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 59 | 134 | 2.4E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 90 | 127 | 6.9E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 90 | 128 | 12.518784 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 187 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G26800.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037484046.1 | E3 ubiquitin-protein ligase Iruka-like [Triticum dicoccoides] | 0 |
| Q9LQX2 | E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6C251 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG023640.