Basic Information
Locus ID:
gene:TRIDC2BG022190
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 150338064 | 150343673 | + | gene:TRIDC2BG022190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 65,492.37 Da | 46.43 | 85.75 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 139 | 401 | 8.68135E-133 | - |
| Pfam | PF00069 | Protein kinase domain | 140 | 402 | 3.2E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 430 | 584 | 1.79E-18 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 138 | 441 | 2.29E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 423 | 584 | 4.4E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 137 | 226 | 1.0E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 227 | 422 | 2.5E-60 | - |
| SMART | SM00220 | serkin_6 | 140 | 402 | 1.1E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 140 | 402 | 50.717751 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 444 | 479 | 8.739058 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 264 | 276 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 146 | 172 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 24 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_037483937.1 | calcium/calmodulin-dependent serine/threonine-protein kinase 1-like [Triticum dicoccoides] | 0 |
| Q10KY3 | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CAMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6C1R9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG022190.