Basic Information
Locus ID:
gene:TRIDC2BG020480
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 139777175 | 139783174 | - | gene:TRIDC2BG020480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 43,551.37 Da | 42.68 | 85.64 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 23 | 156 | 3.54157E-27 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 178 | 298 | 9.08144E-64 | - |
| CDD | cd14736 | BACK_AtBPM-like | 298 | 361 | 8.36329E-32 | IPR034090 |
| Pfam | PF00651 | BTB/POZ domain | 185 | 299 | 7.8E-25 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 20 | 158 | 1.6E-34 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 168 | 299 | 9.03E-31 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 21 | 160 | 6.3E-30 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 168 | 294 | 1.0E-35 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 301 | 373 | 4.0E-21 | - |
| SMART | SM00061 | math_3 | 27 | 139 | 1.3E-8 | IPR002083 |
| SMART | SM00225 | BTB_4 | 192 | 301 | 3.2E-23 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 22 | 156 | 22.359793 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 192 | 259 | 17.024332 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_044964591.1 | BTB/POZ and MATH domain-containing protein 1-like [Hordeum vulgare subsp. vulgare] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | F2DRR8 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG020480.