Basic Information
Locus ID:
gene:TRIDC2BG020380
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 139154975 | 139156765 | + | gene:TRIDC2BG020380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 54,497.51 Da | 38.15 | 92.00 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 199 | 466 | 5.45593E-94 | - |
| Pfam | PF00069 | Protein kinase domain | 194 | 462 | 1.1E-50 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 41 | 119 | 1.3E-19 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 176 | 471 | 8.75E-83 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 40 | 215 | 1.15E-40 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 11 | 119 | 5.0E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 178 | 269 | 1.9E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 270 | 476 | 8.0E-59 | - |
| SMART | SM00220 | serkin_6 | 193 | 464 | 8.7E-43 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 193 | 470 | 38.859325 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 199 | 222 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 314 | 326 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_037483825.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum dicoccoides] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6C3Y8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG020380.