Basic Information
Locus ID:
gene:TRIDC2BG019290
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 124996667 | 125000076 | + | gene:TRIDC2BG019290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 81,458.96 Da | 33.77 | 93.06 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 356 | 396 | 1.05334E-4 | - |
| CDD | cd14066 | STKc_IRAK | 475 | 733 | 1.2863E-84 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 49 | 89 | 1.6E-7 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 471 | 733 | 2.5E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 470 | 737 | 6.2E-67 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 544 | 742 | 3.0E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 450 | 543 | 3.6E-22 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 314 | 403 | 1.0E-8 | - |
| SMART | SM00181 | egf_5 | 359 | 403 | 0.0052 | IPR000742 |
| SMART | SM00220 | serkin_6 | 469 | 735 | 1.0E-28 | IPR000719 |
| SMART | SM00181 | egf_5 | 304 | 355 | 97.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 356 | 403 | 3.7E-7 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 469 | 735 | 35.990124 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 475 | 497 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 588 | 600 | - | IPR008271 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 378 | 389 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 356 | 387 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_037483768.1 | wall-associated receptor kinase 1-like isoform X1 [Triticum dicoccoides] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6C148 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG019290.