HalophFGD

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Basic Information
Locus ID: gene:TRIDC2BG019190
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Short Name: SKIP5
Description: F-box-like
Maps and Mapping Data
Chromosome Start End Strand ID
2B 124407923 124411610 - gene:TRIDC2BG019190
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.96 27,819.00 Da 53.30 99.13 0.02
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 26 63 1.3E-8 IPR001810
SUPERFAMILY SSF51126 Pectin lyase-like 75 169 4.19E-10 IPR011050
SUPERFAMILY SSF81383 F-box domain 12 64 1.05E-12 IPR036047
Gene3D G3DSA:1.20.1280.50 - 20 60 1.3E-11 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G54480.1 SKP1/ASK-interacting protein 5. Encodes an SKP1 interacting partner (SKIP5). 0
RefSeq XP_037483763.1 F-box protein SKIP5-like [Triticum dicoccoides] 0
Swiss-Prot Q94FT2 F-box protein SKIP5 OS=Arabidopsis thaliana OX=3702 GN=SKIP5 PE=1 SV=1 0
TrEMBL A0A3B6C3P2 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC2BG019190.

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